Publications

Explore research publications using our multi-omic spatial sequencing platform.

Spatial Sequencing: A Perspective

Brian M. Turczyk, Michele Busby, Allison L. Martin, Evan R. Daugharthy, Daniel Myung, Richard C. Terry, Samuel A. Inverso, Richie E. Kohman, and George Church. Journal of Biomolecular Techniques 31.2 (2020): 1-3.

Select Release Program

The Race to map the human body — one cell at a time

Heidi Ledford. Nature. 542.7642. 20 February 2017

Nanoscale imaging of RNA with expansion microscopy

Fei Chen, Asmamaw T. Wassie, Allison J. Cote, Anubhav Sinha, Shahar Alon, Shoh Asano, Evan R. Daugharthy, Jae-Byum Chang, Adam Marblestone, George M Church, Arjun Raj, Edward S Boyden. Nature Methods 13.8 (2016): 679-684.

Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues

Je Hyuk Lee*, Evan R. Daugharthy*, Jonathan Scheiman, Reza Kalhor,Thomas C. Ferrante, Richard Terry, Brian M. Turczyk, Joyce L. Yang, Ho Suk Lee, John Aach, Kun Zhang, George M. Church. Nature Protocols 10.3 (2015): 442-458.

Rosetta Brains: A strategy for molecularly-annotated connectomics

Adam H. Marblestone, Evan R. Daugharthy, Reza Kalhor, Ian D. Peikon, Justus M. Kebschull, Seth L. Shipman, Yuriy Mishchenko, Je Hyuk Lee, Konrad P. Kording, Edward S. Boyden, Anthony M. Zador, George M. Church. arXiv (2014):1404.5103.

Highly multiplexed subcellular RNA sequencing in situ

Je Hyuk Lee, Evan R. Daugharthy, Jonathan Scheiman, Reza Kalhor, Joyce L. Yang, Thomas C. Ferrante, Richard Terry, Sauveur S. F. Jeanty, Chao Li, Ryoji Amamoto, Derek T. Peters, Brian M. Turczyk, Adam H. Marblestone, Samuel A. Inverso, Amy Bernard, Prashant Mali, Xavier Rios, John Aach, George M. Church. Science 343.6177 (2014): 1360-1363.

Conneconomics: The economics of large-scale neural connectomics

Adam H. Marblestone, Evan R. Daugharthy, Reza Kalhor, Ian D. Peikon, Justus M. Kebschull, Seth L. Shipman, Yuriy Mishchenko, David A. Dalrymple, Bradley M. Zamft, Konrad P. Kording, Edward S. Boyden, Anthony M. Zador, George M. Church. bioRxiv (2013): 001214.

Digital genotyping and haplotyping with polymerase colonies

Robi D. Mitra, Vincent L. Butty, Jay Shendure, Benjamin R. Williams, David E. Housman, and George M. Church. Proceedings of the National Academy of Sciences of the United States of America 100.10 (2003): 5926–5931.